Package: lomb 2.5.0

lomb: Lomb-Scargle Periodogram

Computes the Lomb-Scargle Periodogram and actogram for evenly or unevenly sampled time series. Includes a randomization procedure to obtain exact p-values. Partially based on C original by Press et al. (Numerical Recipes) and the Python module Astropy. For more information see Ruf, T. (1999). The Lomb-Scargle periodogram in biological rhythm research: analysis of incomplete and unequally spaced time-series. Biological Rhythm Research, 30(2), 178-201.

Authors:Thomas Ruf [aut, cre]

lomb_2.5.0.tar.gz
lomb_2.5.0.zip(r-4.7)lomb_2.5.0.zip(r-4.6)lomb_2.5.0.zip(r-4.5)
lomb_2.5.0.tgz(r-4.6-any)lomb_2.5.0.tgz(r-4.5-any)
lomb_2.5.0.tar.gz(r-4.7-any)lomb_2.5.0.tar.gz(r-4.6-any)
lomb_2.5.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
lomb/json (API)

# Install 'lomb' in R:

install.packages('lomb', repos = c('https://thomaspruf.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/thomaspruf/lomb/issues

Datasets:

caradat - Locomotor activiy of a Carabid beetle.
deerdat - Locomotor activiy of a deer.
ibex - Rumen Temperature In An Alpine Ibex
layla - Activiy of a dog.

On CRAN:

4.95 score 9 packages 82 scripts 831 downloads 4 mentions 14 exports 66 dependencies

Last updated from:0827ec1223. Checks:7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	NOTE	151
source / vignettes	OK	192
linux-release-x86_64	NOTE	148
macos-release-arm64	NOTE	145
macos-oldrel-arm64	NOTE	131
windows-devel	NOTE	110
windows-release	NOTE	97
windows-oldrel	NOTE	108
wasm-release	OK	153

Exports:actogram getpeaks ggamma levopt lsp makedf pbaluev pershow photoperiod plot.lsp randlsp summary.lsp summary.randlsp theme_lsp

Dependencies:askpass base64enc bslib cachem cli cpp11 crosstalk curl data.table digest dplyr evaluate farver fastmap fontawesome fs generics ggplot2 glue gridExtra gtable highr htmltools htmlwidgets httr isoband jquerylib jsonlite knitr labeling later lazyeval lifecycle magrittr memoise mime openssl otel pillar pkgconfig plotly pracma promises purrr R6 rappdirs RColorBrewer Rcpp rlang rmarkdown S7 sass scales stringi stringr sys tibble tidyr tidyselect tinytex utf8 vctrs viridisLite withr xfun yaml

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Lomb-Scargle Periodogram	lomb-package lomb
Plot actogram	actogram
Locomotor activiy of a Carabid beetle.	caradat
Locomotor activiy of a deer.	deerdat
Retrieve periodogram peaks	getpeaks
Utility function called by pbaluev()	ggamma
Rumen Temperature In An Alpine Ibex	ibex
Activiy of a dog.	layla
compute level	levopt
Lomb-Scargle Periodogram	lsp
makes a data.frame from an actogram for lsp	makedf
False alarm probability	pbaluev
show periodogram	pershow
Computes photoperiod	photoperiod
Plot Lomb-Scargle Periodogram	plot.lsp
Randomise Lomb-Scargle Periodogram	randlsp
Summarise Lomb-Scargle Periodogram Results	summary.lsp
Summarise Randomised Lomb-Scargle Periodogram Results	summary.randlsp
lsp theme for ggplot2	theme_lsp